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| Publication Date | Article Title | Author(s) |
| 19-Dec-2011 | Accurate proteome-wide protein quantification from high-resolution15N mass spectra | Khan, Z; Amini, S; Bloom, JS; Ruse, C; Caudy, AA; et al |
| 17-Nov-2015 | Beyond the E-Value: Stratified Statistics for Protein Domain Prediction | Ochoa, A; Storey, John D; Llinás, M; Singh, Mona |
| 22-Dec-2013 | CCAT: Combinatorial Code Analysis Tool for transcriptional regulation | Jiang, P; Singh, Mona |
| 30-May-2013 | Computational Assessment of the Cooperativity between RNA Binding Proteins and MicroRNAs in Transcript Decay | Jiang, P; Singh, Mona; Coller, HA |
| 18-Apr-2013 | Computational solutions for omics data | Berger, B; Peng, J; Singh, Mona |
| 5-Apr-2011 | A cost-aggregating integer linear program for motif finding | Kingsford, C; Zaslavsky, E; Singh, Mona |
| 27-Sep-2011 | The Cutoff protein regulates piRNA cluster expression and piRNA production in the Drosophila germline | Pane, A; Jiang, P; Zhao, DY; Singh, Mona; Schupbach, Gertrud M. |
| 7-Nov-2013 | Deep sequencing of large library selections allows computational discovery of diverse sets of zinc fingers that bind common targets | Persikov, AV; Rowland, EF; Oakes, BL; Singh, Mona; Noyes, MB |
| 19-Feb-2020 | Differential Allele-Specific Expression Uncovers Breast Cancer Genes Dysregulated by Cis Noncoding Mutations. | Przytycki, Pawel F; Singh, Mona |
| 25-Aug-2017 | Differential analysis between somatic mutation and germline variation profiles reveals cancer-related genes | Przytycki, PF; Singh, Mona |
| 16-Jan-2013 | Disentangling function from topology to infer the network properties of disease genes | Ghersi, D; Singh, Mona |
| Aug-2017 | Domain prediction with probabilistic directional context. | Ochoa, Alejandro; Singh, Mona |
| 13-May-2011 | An expanded binding model for Cys<inf>2</inf>His<inf>2</inf> zinc finger protein-DNA interfaces | Persikov, AV; Singh, Mona |
| 21-Feb-2013 | From Hub Proteins to Hub Modules: The Relationship Between Essentiality and Centrality in the Yeast Interactome at Different Scales of Organization | Song, J; Singh, Mona |
| 5-Oct-2015 | Genome-Wide Detection and Analysis of Multifunctional Genes | Pritykin, Y; Ghersi, D; Singh, Mona |
| 2020 | A Guided Network Propagation Approach to Identify Disease Genes that Combines Prior and New Information | Hristov, Borislav H; Chazelle, Bernard; Singh, Mona |
| 18-Apr-2017 | Integrative analysis unveils new functions for the Drosophila Cutoff protein in noncoding RNA biogenesis and gene regulation | Pritykin, Y; Brito, T; Schupbach, Gertrud M.; Singh, Mona; Pane, A |
| 19-Dec-2013 | Interaction-based discovery of functionally important genes in cancers | Ghersi, D; Singh, Mona |
| 28-Mar-2014 | MolBLOCKS: Decomposing small molecule sets and uncovering enriched fragments | Ghersi, D; Singh, Mona |
| 27-Sep-2017 | Network-based coverage of mutational profiles reveals cancer genes | Hristov, BH; Singh, Mona |
