Showing results 12 to 31 of 31
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Publication Date | Article Title | Author(s) |
6-Jan-2014 | Forcefield_NCAA: Ab Initio Charge Parameters to Aid in the Discovery and Design of Therapeutic Proteins and Peptides with Unnatural Amino Acids and Their Application to Complement Inhibitors of the Compstatin Family | Khoury, George A; Smadbeck, James; Tamamis, Phanourios; Vandris, Andrew C; Kieslich, Chris A; et al |
22-Nov-2013 | Forcefield_PTM: Ab Initio Charge and AMBER Forcefield Parameters for Frequently Occurring Post-Translational Modifications | Khoury, George A; Thompson, Jeff P; Smadbeck, James; Kieslich, Chris A; Floudas, Christodoulos A |
2014 | A Framework for Globally Optimizing Mixed-Integer Signomial Programs | Misener, Ruth; Floudas, Christodoulos A |
2012 | Global optimization of mixed-integer quadratically-constrained quadratic programs (MIQCQP) through piecewise-linear and edge-concave relaxations | Misener, Ruth; Floudas, Christodoulos A |
2013 | GloMIQO: Global mixed-integer quadratic optimizer | Misener, Ruth; Floudas, Christodoulos A |
10-Jan-2012 | Molecular Dynamics in Drug Design: New Generations of Compstatin Analogs | Tamamis, Phanourios; López de Victoria, Aliana; Gorham, Ronald D; Bellows-Peterson, Meghan L; Pierou, Panayiota; et al |
24-Apr-2014 | Molecular Recognition of CCR5 by an HIV-1 gp120 V3 Loop | Tamamis, Phanourios; Floudas, Christodoulos A |
17-Sep-2013 | Molecular Recognition of CXCR4 by a Dual Tropic HIV-1 gp120 V3 Loop | Tamamis, Phanourios; Floudas, Christodoulos A |
2015 | New Compstatin Peptides Containing N-Terminal Extensions and Non-Natural Amino Acids Exhibit Potent Complement Inhibition and Improved Solubility Characteristics | Gorham, Ronald D; Forest, David L; Khoury, George A; Smadbeck, James; Beecher, Consuelo N; et al |
2013 | Novel compstatin family peptides inhibit complement activation by drusen-like deposits in human retinal pigmented epithelial cell cultures | Gorham, Ronald D; Forest, David L; Tamamis, Phanourios; López de Victoria, Aliana; Kraszni, Márta; et al |
2012 | Novel protein identification methods for biomarker discovery via a proteomic analysis of periodontally healthy and diseased gingival crevicular fluid samples | Baliban, Richard C; Sakellari, Dimitra; Li, Zukui; DiMaggio, Peter A; Garcia, Benjamin A; et al |
2014 | De Novo Design and Experimental Characterization of Ultrashort Self-Associating Peptides | Smadbeck, James; Chan, Kiat Hwa; Khoury, George A; Xue, Bo; Robinson, Robert C; et al |
28-Feb-2014 | De Novo Peptide Design and Experimental Validation of Histone Methyltransferase Inhibitors | Smadbeck, James; Peterson, Meghan B; Zee, Barry M; Garapaty, Shivani; Mago, Aashna; et al |
2012 | De Novo Peptide Design with C3a Receptor Agonist and Antagonist Activities: Theoretical Predictions and Experimental Validation | Bellows-Peterson, Meghan L; Fung, Ho Ki; Floudas, Christodoulos A; Kieslich, Chris A; Zhang, Li; et al |
13-Jul-2012 | PILOT_PROTEIN: Identification of Unmodified and Modified Proteins via High-Resolution Mass Spectrometry and Mixed-Integer Linear Optimization | Baliban, Richard C; DiMaggio, Peter A; Plazas-Mayorca, Mariana D; Garcia, Benjamin A; Floudas, Christodoulos A |
Feb-2014 | Protein folding and de novo protein design for biotechnological applications | Khoury, George A; Smadbeck, James; Kieslich, Chris A; Floudas, Christodoulos A |
25-Jul-2013 | Protein WISDOM: A Workbench for In silico De novo Design of BioMolecules | Smadbeck, James; Peterson, Meghan B; Khoury, George A; Taylor, Martin S; Floudas, Christodoulos A |
6-Feb-2013 | Thermochemical Conversion of Duckweed Biomass to Gasoline, Diesel, and Jet Fuel: Process Synthesis and Global Optimization | Baliban, Richard C; Elia, Josephine A; Floudas, Christodoulos A; Xiao, Xin; Zhang, Zhijian; et al |
2014 | WeFold: A coopetition for protein structure prediction | Khoury, George A; Liwo, Adam; Khatib, Firas; Zhou, Hongyi; Chopra, Gaurav; et al |
9-Mar-2012 | β-sheet Topology Prediction with High Precision and Recall for β and Mixed α/β Proteins | Subramani, Ashwin; Floudas, Christodoulos A |